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Multiple Sequence Alignment

Protocols 1-10 of 10 total displayed.

Most recent content (1 Apr 2008)
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Maximum Parsimony Method for Phylogenetic Prediction
David W. Mount
CSH Protocols; 2008; doi:10.1101/pdb.top32 [Abstract] [Full text]

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Distance Methods for Phylogenetic Prediction
David W. Mount
CSH Protocols; 2008; doi:10.1101/pdb.top33 [Abstract] [Full text]

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The Maximum Likelihood Approach for Phylogenetic Prediction
David W. Mount
CSH Protocols; 2008; doi:10.1101/pdb.top34 [Abstract] [Full text]

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Choosing a Method for Phylogenetic Prediction
David W. Mount
CSH Protocols; 2008; doi:10.1101/pdb.ip49 [Abstract] [Full text]

Past content (since Jul 2007)
Topic Introduction Icon

Strategies for Sequence Similarity Database Searches
David W. Mount
CSH Protocols; 2007; doi:10.1101/pdb.top15 [Abstract] [Full text]

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Using a FASTA Sequence Database Similarity Search
David W. Mount
CSH Protocols; 2007; doi:10.1101/pdb.top16 [Abstract] [Full text]

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Using the Basic Local Alignment Search Tool (BLAST)
David W. Mount
CSH Protocols; 2007; doi:10.1101/pdb.top17 [Abstract] [Full text]

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Recommended Steps for a FASTA Search
David W. Mount
CSH Protocols; 2007; doi:10.1101/pdb.ip40 [Abstract] [Full text]

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Steps Used by the BLAST Algorithm
David W. Mount
CSH Protocols; 2007; doi:10.1101/pdb.ip41 [Abstract] [Full text]

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SNP Mining from Maize 454 EST Sequences
W. Brad Barbazuk, Scott Emrich, and Patrick S. Schnable
CSH Protocols; 2007; doi:10.1101/pdb.prot4786 [Abstract] [Full text]