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Computational Biology

Protocols 1-10 of 15 total displayed.

Most recent content (1 Apr 2008)
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Maximum Parsimony Method for Phylogenetic Prediction
David W. Mount
CSH Protocols; 2008; doi:10.1101/pdb.top32 [Abstract] [Full text]

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Distance Methods for Phylogenetic Prediction
David W. Mount
CSH Protocols; 2008; doi:10.1101/pdb.top33 [Abstract] [Full text]

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The Maximum Likelihood Approach for Phylogenetic Prediction
David W. Mount
CSH Protocols; 2008; doi:10.1101/pdb.top34 [Abstract] [Full text]

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Choosing a Method for Phylogenetic Prediction
David W. Mount
CSH Protocols; 2008; doi:10.1101/pdb.ip49 [Abstract] [Full text]

Past content (since Jul 2007)
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Calculation of Spot Reliability Evaluation Scores (SRED) for DNA Microarray Data
Kazuro Shimokawa, Rimantas Kodzius, Yonehiro Matsumura, and Yoshihide Hayashizaki
CSH Protocols; 2008; doi:10.1101/pdb.prot4937 [Abstract] [Full text]

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Calculation of Absolute Expression Values for DNA Microarray Data
Kazuro Shimokawa, Rimantas Kodzius, Yonehiro Matsumura, and Yoshihide Hayashizaki
CSH Protocols; 2008; doi:10.1101/pdb.prot4938 [Abstract] [Full text]

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Using the SERV Applet to Detect Tandem Repeats in DNA Sequences and to Predict Their Variability
Matthieu Legendre and Kevin J. Verstrepen
CSH Protocols; 2008; doi:10.1101/pdb.ip50 [Abstract] [Full text]

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Dot Matrix Pairwise Sequence Comparison
David W. Mount
CSH Protocols; 2007; doi:10.1101/pdb.top31 [Abstract] [Full text]

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Data Analysis Methods for Fluorescence Imaging with One-Nanometer Accuracy (FIONA)
Paul R. Selvin, Tyler Lougheed, Melinda Tonks Hoffman, Hyokeun Park, Hamza Balci, Benjamin H. Blehm, and Erdal Toprak
CSH Protocols; 2007; doi:10.1101/pdb.ip46 [Abstract] [Full text]

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Strategies for Sequence Similarity Database Searches
David W. Mount
CSH Protocols; 2007; doi:10.1101/pdb.top15 [Abstract] [Full text]

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